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Aliases : Ceric.1Z123400
Description : nucleoporin of nuclear pore complex *(NUP1/NUP136) & original description: pacid=50597132 polypeptide=Ceric.1Z123400.1.p locus=Ceric.1Z123400 ID=Ceric.1Z123400.1.v2.1 annot-version=v2.1
Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.1Z123400.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00164270 | evm_27.TU.AmTr_v1... | Protein translocation.nucleus.nucleocytoplasmic... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G10650 | No alias | BEST Arabidopsis thaliana protein match is:... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g06113 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g31899 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g60762 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aop_g08994 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g17818 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g05781 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g49204 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g04036 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ehy_g26942 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01034601001 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.09 | OrthoFinder output from all 47 species | |
| Gb_18080 | No alias | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.07 | OrthoFinder output from all 47 species | |
| Gb_35130 | No alias | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g30747 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g14234 | No alias | nuclear lamina CRWN-interacting protein *(KAKU4) &... | 0.09 | OrthoFinder output from all 47 species | |
| Mp3g05990.1 | No alias | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g35297 | No alias | nuclear lamina CRWN-interacting protein *(KAKU4) &... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48013 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43950 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g28862 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g10463 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g66188 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.07 | OrthoFinder output from all 47 species | |
| Ppi_g01408 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g02341 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012850 | No alias | not classified & original description: CDS=3-2681 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g13887 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g19952 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19954 | No alias | nuclear lamina CRWN-interacting protein *(KAKU4) &... | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g51943 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g055110.4.1 | Solyc05g055110 | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g006390.2.1 | Solyc11g006390 | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.09 | OrthoFinder output from all 47 species | |
| Spa_g06717 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g07621 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06136 | No alias | nucleoporin of nuclear pore complex *(NUP1/NUP136) &... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e005928_P001 | Zm00001e005928 | NUP1/NUP136 nucleoporin of nuclear pore complex | 0.12 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | HCCA |
| BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010629 | negative regulation of gene expression | IEP | HCCA |
| BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0023051 | regulation of signaling | IEP | HCCA |
| MF | GO:0030695 | GTPase regulator activity | IEP | HCCA |
| BP | GO:0031047 | RNA-mediated gene silencing | IEP | HCCA |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | HCCA |
| BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | HCCA |
| BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
| BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
| BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
| BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| MF | GO:0060589 | nucleoside-triphosphatase regulator activity | IEP | HCCA |
| MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
| MF | GO:0140678 | molecular function inhibitor activity | IEP | HCCA |
| BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |