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  5. Ceric.1Z105200.1

Ceric.1Z105200.1 (Ceric.1Z105200)


Aliases : Ceric.1Z105200

Description : large subunit gamma of AP-1 trans-Golgi network cargo adaptor complex & original description: pacid=50579264 polypeptide=Ceric.1Z105200.1.p locus=Ceric.1Z105200 ID=Ceric.1Z105200.1.v2.1 annot-version=v2.1


Gene families : OG0002603 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z105200.1

Target Alias Description ECC score Gene Family Method Actions
AT1G23900 GAMMA-ADAPTIN 1,... gamma-adaptin 1 0.05 OrthoFinder output from all 47 species
Adi_g008187 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Aev_g07309 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Ala_g14098 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Als_g14323 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Aob_g02329 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Aop_g01386 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Aspi01Gene50409.t1 Aspi01Gene50409 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15244 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.33 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Cre16.g676650 GAMMA-ADAPTIN 1,... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 OrthoFinder output from all 47 species
Dcu_g01942 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.13 OrthoFinder output from all 47 species
Dde_g23696 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Ehy_g08600 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
GSVIVT01020209001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.1 OrthoFinder output from all 47 species
Gb_02741 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
LOC_Os02g56110.1 LOC_Os02g56110 large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
LOC_Os06g07090.1 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.15 OrthoFinder output from all 47 species
Len_g40020 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
MA_10432717g0010 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
MA_32067g0010 GAMMA-ADAPTIN 1,... AP-1 complex subunit gamma-1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_675g0010 No alias AP-1 complex subunit gamma-2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Mp2g02140.1 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Msp_g09172 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Nbi_g04417 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Ore_g15695 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Pir_g10906 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020158 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Smo168054 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.06 OrthoFinder output from all 47 species
Solyc04g025870.4.1 Solyc04g025870 large subunit gamma of AP-1 trans-Golgi network cargo... 0.11 OrthoFinder output from all 47 species
Solyc05g005780.3.1 Solyc05g005780 large subunit gamma of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Spa_g55808 No alias large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Tin_g02865 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Zm00001e023661_P002 GAMMA-ADAPTIN 1,... large subunit gamma of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Zm00001e030101_P002 Zm00001e030101 large subunit gamma of AP-1 trans-Golgi network cargo... 0.12 OrthoFinder output from all 47 species
Zm00001e036396_P001 Zm00001e036396 large subunit gamma of AP-1 trans-Golgi network cargo... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 22 353
No external refs found!