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  5. Ceric.1Z102200.1

Ceric.1Z102200.1 (ATLUP2, LUP2, Ceric.1Z102200)


Aliases : ATLUP2, LUP2, Ceric.1Z102200

Description : squalene-hopene cyclase & original description: pacid=50580656 polypeptide=Ceric.1Z102200.1.p locus=Ceric.1Z102200 ID=Ceric.1Z102200.1.v2.1 annot-version=v2.1


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z102200.1
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Ala_g28633 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69424 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24548.t1 Aspi01Gene24548 squalene-hopene cyclase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24550.t1 Aspi01Gene24550 squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24551.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene24552.t1 Aspi01Gene24552 squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36059.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36061.t1 Aspi01Gene36061 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene36140.t1 Aspi01Gene36140 squalene-hopene cyclase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63178.t1 Aspi01Gene63178 EC_5.4 intramolecular transferase & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63179.t1 Aspi01Gene63179 EC_5.4 intramolecular transferase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.24G076600.1 ATLUP2, LUP2,... squalene-hopene cyclase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.24G076700.1 Ceric.24G076700 not classified & original description: pacid=50628955... 0.04 OrthoFinder output from all 47 species
Lfl_g31905 No alias squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g14000.1 THAS1, THAS Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.01 OrthoFinder output from all 47 species
Tin_g16804 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR032697 SQ_cyclase_N 4 204
IPR032696 SQ_cyclase_C 213 453
IPR032696 SQ_cyclase_C 468 571
No external refs found!