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  5. Ceric.1Z074000.1

Ceric.1Z074000.1 (Ceric.1Z074000)


Aliases : Ceric.1Z074000

Description : component *(NOT2) of mRNA deadenylation CCR4-NOT complex & original description: pacid=50637308 polypeptide=Ceric.1Z074000.1.p locus=Ceric.1Z074000 ID=Ceric.1Z074000.1.v2.1 annot-version=v2.1


Gene families : OG0002132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z074000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00180540 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.02 OrthoFinder output from all 47 species
AT1G07705 No alias NOT2 / NOT3 / NOT5 family 0.04 OrthoFinder output from all 47 species
Ala_g06550 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species
Aop_g12649 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.02 OrthoFinder output from all 47 species
Cba_g77312 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020554.138 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 OrthoFinder output from all 47 species
Dcu_g06443 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.05 OrthoFinder output from all 47 species
GSVIVT01025059001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.04 OrthoFinder output from all 47 species
Gb_27080 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.03 OrthoFinder output from all 47 species
MA_19243g0010 VIP2, AtVIP2 component NOT2 of mRNA deadenylation CCR4-NOT complex 0.03 OrthoFinder output from all 47 species
Mp1g21150.1 No alias component NOT2 of mRNA deadenylation CCR4-NOT complex 0.04 OrthoFinder output from all 47 species
Pnu_g20979 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.02 OrthoFinder output from all 47 species
Ppi_g11802 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species
Solyc06g075590.4.1 Solyc06g075590 component NOT2 of mRNA deadenylation CCR4-NOT complex 0.03 OrthoFinder output from all 47 species
Solyc11g072940.2.1 Solyc11g072940 component NOT2 of mRNA deadenylation CCR4-NOT complex 0.04 OrthoFinder output from all 47 species
Spa_g10737 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.03 OrthoFinder output from all 47 species
Tin_g20967 No alias component *(NOT2) of mRNA deadenylation CCR4-NOT complex... 0.02 OrthoFinder output from all 47 species
Zm00001e031975_P003 VIP2, AtVIP2,... component NOT2 of mRNA deadenylation CCR4-NOT complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR007282 NOT2/3/5_C 534 645
No external refs found!