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  5. Ceric.1Z048700.1

Ceric.1Z048700.1 (RPN5B, Ceric.1Z048700)


Aliases : RPN5B, Ceric.1Z048700

Description : regulatory component *(RPN5) of 26S proteasome & original description: pacid=50569450 polypeptide=Ceric.1Z048700.1.p locus=Ceric.1Z048700 ID=Ceric.1Z048700.1.v2.1 annot-version=v2.1


Gene families : OG0003644 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.1Z048700.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00018620 RPN5B,... Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
AT5G09900 EMB2107, MSA, RPN5A 26S proteasome regulatory subunit, putative (RPN5) 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021348.57 RPN5B Protein degradation.26S proteasome.regulatory... 0.05 OrthoFinder output from all 47 species
Cre14.g632775 RPN5B Protein degradation.26S proteasome.regulatory... 0.07 OrthoFinder output from all 47 species
GSVIVT01022276001 RPN5B Protein degradation.26S proteasome.regulatory... 0.04 OrthoFinder output from all 47 species
Gb_00178 EMB2107, MSA, RPN5A regulatory component RPN5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
LOC_Os03g63430.1 RPN5B, LOC_Os03g63430 regulatory component RPN5 of 26S proteasome 0.06 OrthoFinder output from all 47 species
MA_10427293g0010 RPN5B regulatory component RPN5 of 26S proteasome 0.03 OrthoFinder output from all 47 species
MA_10435598g0010 EMB2107, MSA, RPN5A regulatory component RPN5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Mp6g06620.1 RPN5B regulatory component RPN5 of 26S proteasome 0.1 OrthoFinder output from all 47 species
Ore_g04551 EMB2107, MSA, RPN5A regulatory component *(RPN5) of 26S proteasome &... 0.02 OrthoFinder output from all 47 species
Pp3c10_9730V3.1 RPN5B, Pp3c10_9730 26S proteasome regulatory subunit, putative (RPN5) 0.04 OrthoFinder output from all 47 species
Sam_g24935 No alias regulatory component *(RPN5) of 26S proteasome &... 0.03 OrthoFinder output from all 47 species
Smo166175 RPN5B Protein degradation.26S proteasome.regulatory... 0.03 OrthoFinder output from all 47 species
Solyc04g051370.4.1 RPN5B, Solyc04g051370 regulatory component RPN5 of 26S proteasome 0.05 OrthoFinder output from all 47 species
Zm00001e011647_P002 RPN5B, Zm00001e011647 regulatory component RPN5 of 26S proteasome 0.07 OrthoFinder output from all 47 species
Zm00001e016264_P001 RPN5B, Zm00001e016264 regulatory component RPN5 of 26S proteasome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR040896 RPN5_C 439 471
IPR000717 PCI_dom 325 433
No external refs found!