Aliases : RPOA, Ceric.1Z019700
Description : not classified & original description: pacid=50586392 polypeptide=Ceric.1Z019700.1.p locus=Ceric.1Z019700 ID=Ceric.1Z019700.1.v2.1 annot-version=v2.1
Gene families : OG0006820 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006820_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00740 | RPOA | RNA polymerase subunit alpha | 0.17 | OrthoFinder output from all 47 species | |
Aev_g02093 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.2 | OrthoFinder output from all 47 species | |
Als_g16097 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.13 | OrthoFinder output from all 47 species | |
Aob_g19924 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.1 | OrthoFinder output from all 47 species | |
Cba_g60899 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.06 | OrthoFinder output from all 47 species | |
Ceric.05G041900.1 | RPOA, Ceric.05G041900 | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.16 | OrthoFinder output from all 47 species | |
Ceric.38G008600.1 | RPOA, Ceric.38G008600 | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.17 | OrthoFinder output from all 47 species | |
Dcu_g20888 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.1 | OrthoFinder output from all 47 species | |
Gb_17282 | RPOA | DNA-directed RNA polymerase subunit alpha OS=Cycas... | 0.09 | OrthoFinder output from all 47 species | |
Gb_25929 | RPOA | DNA-directed RNA polymerase subunit alpha OS=Cycas... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36750 | RPOA | RpoA core component plastid-encoded RNA polymerase | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os04g16842.1 | RPOA, LOC_Os04g16842 | RpoA core component plastid-encoded RNA polymerase | 0.25 | OrthoFinder output from all 47 species | |
LOC_Os06g39700.1 | RPOA, LOC_Os06g39700 | RpoA core component plastid-encoded RNA polymerase | 0.21 | OrthoFinder output from all 47 species | |
LOC_Os09g07910.1 | RPOA, LOC_Os09g07910 | DNA-directed RNA polymerase subunit alpha OS=Oryza... | 0.12 | OrthoFinder output from all 47 species | |
Lfl_g19118 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.2 | OrthoFinder output from all 47 species | |
Mpzg00720.1 | RPOA | RpoA core component plastid-encoded RNA polymerase | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g19365 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.12 | OrthoFinder output from all 47 species | |
Pir_g12462 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.19 | OrthoFinder output from all 47 species | |
Sam_g01699 | No alias | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.07 | OrthoFinder output from all 47 species | |
Solyc00g500029.1.1 | RPOA, Solyc00g500029 | DNA-directed RNA polymerase subunit alpha OS=Solanum... | 0.05 | OrthoFinder output from all 47 species | |
Solyc00g500074.1.1 | RPOA, Solyc00g500074 | DNA-directed RNA polymerase subunit alpha OS=Solanum... | 0.05 | OrthoFinder output from all 47 species | |
Solyc00g500157.1.1 | RPOA, Solyc00g500157 | RpoA core component plastid-encoded RNA polymerase | 0.15 | OrthoFinder output from all 47 species | |
Solyc01g017440.1.1 | RPOA, Solyc01g017440 | DNA-directed RNA polymerase subunit alpha OS=Solanum... | 0.14 | OrthoFinder output from all 47 species | |
Spa_g18101 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.07 | OrthoFinder output from all 47 species | |
Tin_g20913 | RPOA | core component *(RpoA) of plastid-encoded RNA polymerase... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
MF | GO:0009055 | electron transfer activity | IEP | HCCA |
BP | GO:0009117 | nucleotide metabolic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1902600 | proton transmembrane transport | IEP | HCCA |
No external refs found! |