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Aliases : Ceric.19G013000
Description : E3 ubiquitin ligase *(RMA/MUSE) & original description: pacid=50576366 polypeptide=Ceric.19G013000.1.p locus=Ceric.19G013000 ID=Ceric.19G013000.1.v2.1 annot-version=v2.1
Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.19G013000.1 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aop_g12201 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene14817.t1 | Aspi01Gene14817 | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene43421.t1 | Aspi01Gene43421 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024585 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: CDS=1-897 | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08588 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os04g44820.1 | RMA3, ATRMA3,... | RING-HC-class E3 ligase | 0.05 | OrthoFinder output from all 47 species | |
| Len_g01102 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.1 | OrthoFinder output from all 47 species | |
| Len_g03115 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.13 | OrthoFinder output from all 47 species | |
| Nbi_g12014 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.18 | OrthoFinder output from all 47 species | |
| Nbi_g13792 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.18 | OrthoFinder output from all 47 species | |
| Ppi_g62388 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Spa_g10565 | No alias | E3 ubiquitin ligase *(RMA/MUSE) & original description: none | 0.21 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| CC | GO:0005576 | extracellular region | IEP | HCCA |
| CC | GO:0005618 | cell wall | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005976 | polysaccharide metabolic process | IEP | HCCA |
| BP | GO:0006073 | cellular glucan metabolic process | IEP | HCCA |
| MF | GO:0016762 | xyloglucan:xyloglucosyl transferase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
| BP | GO:0044042 | glucan metabolic process | IEP | HCCA |
| BP | GO:0044264 | cellular polysaccharide metabolic process | IEP | HCCA |
| MF | GO:0046527 | glucosyltransferase activity | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |