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  5. Ceric.18G084600.1

Ceric.18G084600.1 (SCC3, ATSCC3, Ceric.18G084600)


Aliases : SCC3, ATSCC3, Ceric.18G084600

Description : component *(SCC3) of cohesin regulator complex & original description: pacid=50621430 polypeptide=Ceric.18G084600.1.p locus=Ceric.18G084600 ID=Ceric.18G084600.1.v2.1 annot-version=v2.1


Gene families : OG0004065 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004065_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.18G084600.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00122610 SCC3, ATSCC3,... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Adi_g059337 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.05 OrthoFinder output from all 47 species
Ala_g03952 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Als_g61925 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Aob_g03603 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Cre17.g736400 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Dcu_g12990 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g08564 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01011020001 SCC3, ATSCC3 Cell cycle.mitosis and meiosis.sister chromatid... 0.06 OrthoFinder output from all 47 species
LOC_Os05g09620.1 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.07 OrthoFinder output from all 47 species
Lfl_g34617 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.05 OrthoFinder output from all 47 species
MA_10426289g0010 SCC3, ATSCC3 Sister-chromatid cohesion protein 3 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
MA_10434927g0010 SCC3, ATSCC3 component SCC3 of cohesin regulator complex 0.03 OrthoFinder output from all 47 species
MA_77394g0010 SCC3, ATSCC3 component SCC3 of cohesin regulator complex 0.05 OrthoFinder output from all 47 species
Nbi_g08679 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Ore_g15148 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Pir_g10942 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.04 OrthoFinder output from all 47 species
Ppi_g04693 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.02 OrthoFinder output from all 47 species
Sam_g50912 No alias component *(SCC3) of cohesin regulator complex &... 0.05 OrthoFinder output from all 47 species
Solyc05g026510.4.1 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.04 OrthoFinder output from all 47 species
Spa_g04594 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Tin_g08841 SCC3, ATSCC3 component *(SCC3) of cohesin regulator complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e011344_P004 SCC3, ATSCC3,... component SCC3 of cohesin regulator complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013721 STAG 196 304
No external refs found!