Ceric.18G065900.1 (PGP2, Ceric.18G065900)

Aliases : PGP2, Ceric.18G065900

Description : subfamily ABCB transporter & original description: pacid=50621487 polypeptide=Ceric.18G065900.1.p locus=Ceric.18G065900 ID=Ceric.18G065900.1.v2.1 annot-version=v2.1

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.18G065900.1
Cluster	HCCA: Cluster_157

Target	Alias	Description	ECC score	Gene Family Method
Ala_g33590	PGP2	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Als_g18810	PGP2	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g36046	ABCB19,...	subfamily ABCB transporter & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene13015.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene43898.t1	PGP20, Aspi01Gene43898	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g12819	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g12443	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g20229	PGP11	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g12010	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g23811	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Len_g45184	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g19646	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
MA_10429045g0010	No alias	ABC transporter B family member 15 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_114017g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_76406g0010	ATPGP4, PGP4, ABCB4, MDR4	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_8240705g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_82945g0010	No alias	Putative multidrug resistance protein OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Ore_g13949	PGP12	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Smo419451	No alias	Solute transport.primary active transport.ABC...	0.03	OrthoFinder output from all 47 species
Spa_g55712	No alias	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	IEA	Interproscan
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	1007	1156
IPR011527	ABC1_TM_dom	670	940
IPR011527	ABC1_TM_dom	39	311
IPR003439	ABC_transporter-like_ATP-bd	382	530

External Links

No external refs found!

Ceric.18G065900.1 (PGP2, Ceric.18G065900)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation