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  5. Ceric.18G053500.1

Ceric.18G053500.1 (PSAC, Ceric.18G053500)


Aliases : PSAC, Ceric.18G053500

Description : component *(PsaC) of PS-I complex & original description: pacid=50620966 polypeptide=Ceric.18G053500.1.p locus=Ceric.18G053500 ID=Ceric.18G053500.1.v2.1 annot-version=v2.1


Gene families : OG0010193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0010193_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.18G053500.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
ATCG01060 PSAC iron-sulfur cluster binding;electron carriers;4 iron, 4... 0.08 OrthoFinder output from all 47 species
Ceric.16G017800.1 PSAC, Ceric.16G017800 component *(PsaC) of PS-I complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.35G068500.1 PSAC, Ceric.35G068500 component *(PsaC) of PS-I complex & original... 0.04 OrthoFinder output from all 47 species
LOC_Os06g46436.1 LOC_Os06g46436 component PsaC of PS-I complex 0.04 OrthoFinder output from all 47 species
LOC_Os07g22498.1 LOC_Os07g22498 component PsaC of PS-I complex 0.04 OrthoFinder output from all 47 species
LOC_Os10g21406.1 LOC_Os10g21406 component PsaC of PS-I complex 0.04 OrthoFinder output from all 47 species
Solyc02g011760.1.1 PSAC, Solyc02g011760 Photosystem I iron-sulfur center OS=Cucumis sativus... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!