Ceric.18G035200.1 (Ceric.18G035200)

Aliases : Ceric.18G035200

Description : mTERF-type transcription factor & original description: pacid=50621089 polypeptide=Ceric.18G035200.1.p locus=Ceric.18G035200 ID=Ceric.18G035200.1.v2.1 annot-version=v2.1

Gene families : OG0003109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003109_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.18G035200.1
Cluster	HCCA: Cluster_155

Target	Alias	Description	ECC score	Gene Family Method
AT4G02990	No alias	Mitochondrial transcription termination factor family protein	0.05	OrthoFinder output from all 47 species
Adi_g025507	No alias	mTERF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Als_g10946	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g04492	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g09011	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g40985	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g06807	No alias	mTERF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_08960	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	OrthoFinder output from all 47 species
Gb_36311	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.03	OrthoFinder output from all 47 species
Lfl_g04879	No alias	mTERF-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
MA_138082g0010	No alias	transcription factor (mTERF). mTERF mitochondrial RNA...	0.03	OrthoFinder output from all 47 species
MA_39589g0010	No alias	transcription factor (mTERF). mTERF4 plastidial RNA...	0.04	OrthoFinder output from all 47 species
Msp_g19419	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g15337	No alias	mTERF-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g05386	No alias	mTERF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e023745_P001	Zm00001e023745	transcription factor (mTERF). mTERF mitochondrial RNA...	0.03	OrthoFinder output from all 47 species
Zm00001e027106_P001	Zm00001e027106	transcription factor (mTERF). mTERF4 plastidial RNA...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
MF	GO:0008173	RNA methyltransferase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003690	MTERF	437	748

External Links

No external refs found!

Ceric.18G035200.1 (Ceric.18G035200)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation