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  5. Ceric.17G051100.1

Ceric.17G051100.1 (Ceric.17G051100)


Aliases : Ceric.17G051100

Description : nucleoporin of nuclear pore complex *(NUP50) & original description: pacid=50618556 polypeptide=Ceric.17G051100.1.p locus=Ceric.17G051100 ID=Ceric.17G051100.1.v2.1 annot-version=v2.1


Gene families : OG0003460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003460_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Ceric.17G051100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00196190 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
Ala_g06239 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species
Sam_g35957 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.03 OrthoFinder output from all 47 species
Sam_g49574 No alias nucleoporin of nuclear pore complex *(NUP50) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA Interproscan
BP GO:0046907 intracellular transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR015007 NUP2/50/61 13 73
IPR000156 Ran_bind_dom 385 496
No external refs found!