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  5. Ceric.17G039400.1

Ceric.17G039400.1 (EXP15, ATEXPA15,...)


Aliases : EXP15, ATEXPA15, ATHEXP ALPHA 1.3, ATEXP15, EXPA15, Ceric.17G039400

Description : alpha-class expansin & original description: pacid=50618419 polypeptide=Ceric.17G039400.1.p locus=Ceric.17G039400 ID=Ceric.17G039400.1.v2.1 annot-version=v2.1


Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.17G039400.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Aev_g37023 ATEXPA4, ATEXP4,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04935 EXPA16, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36017 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g44449 ATEXPA10,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene42895.t1 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0041.g026744 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=9-821 0.03 OrthoFinder output from all 47 species
Azfi_s0206.g057815 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=254-1036 0.03 OrthoFinder output from all 47 species
Azfi_s0515.g074978 ATEXPA10,... alpha-class expansin & original description: CDS=109-912 0.03 OrthoFinder output from all 47 species
Azfi_s0578.g078256 EXPA16, ATHEXP... alpha-class expansin & original description: CDS=388-1158 0.03 OrthoFinder output from all 47 species
Ceric.15G033100.1 ATEXPA1, EXP1,... alpha-class expansin & original description:... 0.07 OrthoFinder output from all 47 species
Dcu_g02593 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01004469001 No alias Expansin-like B1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_01048 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_01958 EXPA8, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Gb_20678 EXP15, ATEXPA15,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
LOC_Os05g19600.1 LOC_Os05g19600 alpha-class expansin 0.02 OrthoFinder output from all 47 species
Len_g18380 ATEXPA11, ATHEXP... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
MA_134592g0010 EXPA16, ATHEXP... alpha-class expansin 0.02 OrthoFinder output from all 47 species
MA_45587g0020 ATEXP7, EXPA7,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
MA_9323664g0010 EXPB1, ATEXPB1,... Expansin-B3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g20420.1 EXPA16, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Nbi_g06079 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08930 EXPB1, ATEXPB1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09043 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16629 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c21_1850V3.1 ATEXPA10,... expansin A1 0.03 OrthoFinder output from all 47 species
Pp3c24_9260V3.1 Pp3c24_9260 expansin A1 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006532 ATEXPA10,... not classified & original description: CDS=836-1285 0.04 OrthoFinder output from all 47 species
Sam_g47903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo102623 ATEXPA10,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Smo419575 EXPA16, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Smo75237 ATEXP7, EXPA7,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 OrthoFinder output from all 47 species
Smo90935 EXPA16, ATHEXP... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 OrthoFinder output from all 47 species
Smo91129 EXP15, ATEXPA15,... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 OrthoFinder output from all 47 species
Solyc04g081870.4.1 ATEXPA11, ATHEXP... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Solyc06g076220.3.1 EXPA6, ATEXP6,... alpha-class expansin 0.04 OrthoFinder output from all 47 species
Solyc09g010860.4.1 ATEXPA3, EXP3,... alpha-class expansin 0.03 OrthoFinder output from all 47 species
Spa_g11698 ATEXPA10,... alpha-class expansin & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25561 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25562 EXP15, ATEXPA15,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g42063 ATEXPA3, EXP3,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48547 ATEXPA10,... alpha-class expansin & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g30407 ATEXPA1, EXP1,... alpha-class expansin & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31784 EXPB3, ATEXPB3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000036_P001 ATHEXP BETA 1.4,... Expansin-B4 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e007438_P001 EXPB3, ATEXPB3,... beta-class expansin 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003839 gamma-glutamylcyclotransferase activity IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016842 amidine-lyase activity IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 170 247
IPR009009 RlpA-like_DPBB 71 159
No external refs found!