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  5. Ceric.17G028300.1

Ceric.17G028300.1 (AMY1, ATAMY1, Ceric.17G028300)


Aliases : AMY1, ATAMY1, Ceric.17G028300

Description : alpha amylase & original description: pacid=50617601 polypeptide=Ceric.17G028300.1.p locus=Ceric.17G028300 ID=Ceric.17G028300.1.v2.1 annot-version=v2.1


Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.17G028300.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0104.g044887 AMY1, ATAMY1 alpha amylase & original description: CDS=1-729 0.03 OrthoFinder output from all 47 species
Dac_g09760 AMY3, ATAMY3 alpha amylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020069001 AMY3, ATAMY3 Carbohydrate metabolism.starch... 0.05 OrthoFinder output from all 47 species
LOC_Os09g28420.1 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
Len_g01238 AMY2, ATAMY2 alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
MA_217935g0010 AMY1, ATAMY1 alpha amylase 0.03 OrthoFinder output from all 47 species
Mp1g24800.1 AMY1, ATAMY1 alpha amylase 0.02 OrthoFinder output from all 47 species
Sam_g16056 No alias alpha amylase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24472 No alias alpha amylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009946_P001 AMY1, ATAMY1,... alpha amylase 0.03 OrthoFinder output from all 47 species
Zm00001e015947_P002 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species
Zm00001e034028_P002 AMY1, ATAMY1,... alpha amylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEA Interproscan
MF GO:0005509 calcium ion binding IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR012850 A-amylase_bs_C 447 507
IPR006047 Glyco_hydro_13_cat_dom 133 426
No external refs found!