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  5. Ceric.17G008500.1

Ceric.17G008500.1 (PHR2, Ceric.17G008500)


Aliases : PHR2, Ceric.17G008500

Description : not classified & original description: pacid=50618046 polypeptide=Ceric.17G008500.1.p locus=Ceric.17G008500 ID=Ceric.17G008500.1.v2.1 annot-version=v2.1


Gene families : OG0002446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.17G008500.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT2G47590 PHR2 photolyase/blue-light receptor 2 0.17 OrthoFinder output from all 47 species
Adi_g079479 PHR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06176 PHR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene52251.t1 PHR2, Aspi01Gene52251 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01961 PHR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07106 PHR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g14608 PHR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12595 PHR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g22295 PHR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g13197 PHR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g11246 PHR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g10865 PHR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_18130V3.1 PHR2, Pp3c1_18130 photolyase/blue-light receptor 2 0.02 OrthoFinder output from all 47 species
Ppi_g16597 PHR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019065 PHR2 not classified & original description: CDS=259-1776 0.09 OrthoFinder output from all 47 species
Smo85247 PHR2 Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc09g075180.3.1 PHR2, Solyc09g075180 Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Spa_g09930 PHR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29926 PHR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29221 PHR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e038222_P001 PHR2, Zm00001e038222 Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 175 342
No external refs found!