Aliases : Ceric.16G062000
Description : linker histone *(H1) & original description: pacid=50588970 polypeptide=Ceric.16G062000.1.p locus=Ceric.16G062000 ID=Ceric.16G062000.1.v2.1 annot-version=v2.1
Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.16G062000.1 | |
Cluster | HCCA: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g35464 | HIS1-3 | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Cba_g25177 | HIS1-3 | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036230001 | No alias | Chromatin organisation.histones.H1 linker histone | 0.03 | OrthoFinder output from all 47 species | |
Pir_g25816 | No alias | linker histone *(H1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Spa_g17524 | No alias | linker histone *(H1) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Spa_g45996 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e011859_P001 | Zm00001e011859 | linker histone (H1) | 0.06 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
BP | GO:0006334 | nucleosome assembly | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 42 | 107 |
No external refs found! |