Ceric.16G061800.1 (IMPA-4, Ceric.16G061800)

Aliases : IMPA-4, Ceric.16G061800

Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) & original description: pacid=50589005 polypeptide=Ceric.16G061800.1.p locus=Ceric.16G061800 ID=Ceric.16G061800.1.v2.1 annot-version=v2.1

Gene families : OG0000665 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000665_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.16G061800.1

Target	Alias	Description	ECC score	Gene Family Method
AT4G02150	IMPA-3, MOS6, ATIMPALPHA3	ARM repeat superfamily protein	0.05	OrthoFinder output from all 47 species
AT5G49310	IMPA-5	importin alpha isoform 5	0.03	OrthoFinder output from all 47 species
Adi_g017442	IMPA-1, IMPA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g09820	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Aop_g35883	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.04	OrthoFinder output from all 47 species
Azfi_s0068.g036443	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.06	OrthoFinder output from all 47 species
Cba_g07650	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Cba_g30258	IMPA-1, IMPA1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cre04.g215850	IMPA-1, IMPA1,...	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
Dcu_g06329	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.02	OrthoFinder output from all 47 species
GSVIVT01018390001	No alias	No description available	0.01	OrthoFinder output from all 47 species
Gb_02102	IMPA-2	Importin subunit alpha-1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Len_g07411	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Msp_g06136	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.04	OrthoFinder output from all 47 species
Nbi_g02066	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Ppi_g12914	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Ppi_g18514	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Spa_g05287	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.03	OrthoFinder output from all 47 species
Spa_g41578	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.04	OrthoFinder output from all 47 species
Tin_g03425	IMPA-1, IMPA1,...	nucleocytoplasmic transport cargo adaptor protein...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
BP	GO:0006606	protein import into nucleus	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
BP	GO:0034504	protein localization to nucleus	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051170	import into nucleus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
MF	GO:0061608	nuclear import signal receptor activity	IEA	Interproscan
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
CC	GO:0005759	mitochondrial matrix	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
CC	GO:0030684	preribosome	IEP	HCCA
CC	GO:0031974	membrane-enclosed lumen	IEP	HCCA
CC	GO:0032040	small-subunit processome	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
CC	GO:0043233	organelle lumen	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
CC	GO:0070013	intracellular organelle lumen	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA
CC	GO:1990904	ribonucleoprotein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000225	Armadillo	316	356
IPR000225	Armadillo	361	397
IPR000225	Armadillo	190	230
IPR000225	Armadillo	401	439
IPR000225	Armadillo	148	186
IPR000225	Armadillo	274	312
IPR000225	Armadillo	105	145
IPR002652	Importin-a_IBB	12	93
IPR032413	Arm_3	456	505

External Links

No external refs found!

Ceric.16G061800.1 (IMPA-4, Ceric.16G061800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation