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  5. Ceric.16G061100.1

Ceric.16G061100.1 (PSBH, Ceric.16G061100)


Aliases : PSBH, Ceric.16G061100

Description : component *(PsbH) of PS-II complex & original description: pacid=50589457 polypeptide=Ceric.16G061100.1.p locus=Ceric.16G061100 ID=Ceric.16G061100.1.v2.1 annot-version=v2.1


Gene families : OG0011086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011086_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G061100.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
ATCG00710 PSBH photosystem II reaction center protein H 0.07 OrthoFinder output from all 47 species
Ceric.05G041600.1 PSBH, Ceric.05G041600 component *(PsbH) of PS-II complex & original... 0.09 OrthoFinder output from all 47 species
Ceric.29G003500.1 PSBH, Ceric.29G003500 component *(PsbH) of PS-II complex & original... 0.09 OrthoFinder output from all 47 species
Ceric.38G008300.1 PSBH, Ceric.38G008300 component *(PsbH) of PS-II complex & original... 0.09 OrthoFinder output from all 47 species
LOC_Os04g16848.1 LOC_Os04g16848 component PsbH of PS-II complex 0.04 OrthoFinder output from all 47 species
LOC_Os06g39704.1 LOC_Os06g39704 component PsbH of PS-II complex 0.04 OrthoFinder output from all 47 species
LOC_Os08g15296.1 LOC_Os08g15296 component PsbH of PS-II complex 0.07 OrthoFinder output from all 47 species
Solyc00g500026.1.1 PSBH, Solyc00g500026 component PsbH of PS-II complex 0.09 OrthoFinder output from all 47 species
Solyc00g500072.1.1 PSBH, Solyc00g500072 component PsbH of PS-II complex 0.09 OrthoFinder output from all 47 species
Solyc11g006675.1.1 PSBH, Solyc11g006675 component PsbH of PS-II complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
CC GO:0009521 photosystem IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016168 chlorophyll binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!