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  5. Ceric.16G051800.1

Ceric.16G051800.1 (Ceric.16G051800)


Aliases : Ceric.16G051800

Description : E3 ubiquitin ligase *(AIRP1) & original description: pacid=50589295 polypeptide=Ceric.16G051800.1.p locus=Ceric.16G051800 ID=Ceric.16G051800.1.v2.1 annot-version=v2.1


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G051800.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT2G27660 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G42060 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT5G43520 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene11277.t1 Aspi01Gene11277 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0052.g031565 No alias not classified & original description: CDS=390-1478 0.04 OrthoFinder output from all 47 species
Azfi_s0408.g068454 No alias not classified & original description: CDS=95-1408 0.06 OrthoFinder output from all 47 species
Ceric.18G064000.1 Ceric.18G064000 E3 ubiquitin ligase *(AIRP1) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z042300.1 Ceric.1Z042300 E3 ubiquitin ligase *(AIRP1) & original description:... 0.04 OrthoFinder output from all 47 species
GSVIVT01034093001 No alias No description available 0.04 OrthoFinder output from all 47 species
LOC_Os08g31280.1 LOC_Os08g31280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18827g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g60934 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015605 No alias not classified & original description: CDS=1-1329 0.03 OrthoFinder output from all 47 species
Solyc01g073800.2.1 Solyc01g073800 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc01g073820.4.1 Solyc01g073820 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc01g073860.3.1 Solyc01g073860 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g097960.1.1 Solyc03g097960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc08g014370.1.1 Solyc08g014370 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc09g011260.2.1 Solyc09g011260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g21651 AtAIRP1, AIRP1 E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 3 46
IPR004146 DC1 56 102
IPR004146 DC1 112 159
IPR001841 Znf_RING 302 344
No external refs found!