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  5. Ceric.16G035200.1

Ceric.16G035200.1 (TEM1, EDF1, Ceric.16G035200)


Aliases : TEM1, EDF1, Ceric.16G035200

Description : AP2-RAV-type transcription factor *(EDF) & original description: pacid=50590062 polypeptide=Ceric.16G035200.1.p locus=Ceric.16G035200 ID=Ceric.16G035200.1.v2.1 annot-version=v2.1


Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.16G035200.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene28731.t1 TEM1, EDF1,... AP2-RAV-type transcription factor *(EDF) & original... 0.03 OrthoFinder output from all 47 species
Dac_g39956 TEM1, EDF1 AP2-RAV-type transcription factor *(EDF) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01011947001 EDF2, AtRAV2,... RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
GSVIVT01027463001 NGA1 RNA biosynthesis.transcriptional activation.B3... 0.05 OrthoFinder output from all 47 species
GSVIVT01033902001 No alias RNA biosynthesis.transcriptional activation.B3... 0.03 OrthoFinder output from all 47 species
LOC_Os06g01860.1 LOC_Os06g01860 transcription factor (RAV/NGATHA) 0.04 OrthoFinder output from all 47 species
LOC_Os10g39190.1 NGA1, LOC_Os10g39190 transcription factor (RAV/NGATHA) 0.03 OrthoFinder output from all 47 species
MA_19420g0020 EDF4, RAV1 transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 OrthoFinder output from all 47 species
MA_23673g0010 EDF4, RAV1 transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 OrthoFinder output from all 47 species
Pir_g49278 EDF4, RAV1 AP2-RAV-type transcription factor *(EDF) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e024165_P001 Zm00001e024165 transcription factor (RAV/NGATHA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 88 135
IPR003340 B3_DNA-bd 219 313
No external refs found!