Aliases : TEM1, EDF1, Ceric.16G035200
Description : AP2-RAV-type transcription factor *(EDF) & original description: pacid=50590062 polypeptide=Ceric.16G035200.1.p locus=Ceric.16G035200 ID=Ceric.16G035200.1.v2.1 annot-version=v2.1
Gene families : OG0000941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000941_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.16G035200.1 | |
Cluster | HCCA: Cluster_143 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aspi01Gene28731.t1 | TEM1, EDF1,... | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dac_g39956 | TEM1, EDF1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011947001 | EDF2, AtRAV2,... | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027463001 | NGA1 | RNA biosynthesis.transcriptional activation.B3... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01033902001 | No alias | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g01860.1 | LOC_Os06g01860 | transcription factor (RAV/NGATHA) | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os10g39190.1 | NGA1, LOC_Os10g39190 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species | |
MA_19420g0020 | EDF4, RAV1 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
MA_23673g0010 | EDF4, RAV1 | transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) | 0.02 | OrthoFinder output from all 47 species | |
Pir_g49278 | EDF4, RAV1 | AP2-RAV-type transcription factor *(EDF) & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e024165_P001 | Zm00001e024165 | transcription factor (RAV/NGATHA) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |