Ceric.16G027500.1 (AGL16, Ceric.16G027500)

Aliases : AGL16, Ceric.16G027500

Description : MADS/AGL-type transcription factor & original description: pacid=50589851 polypeptide=Ceric.16G027500.1.p locus=Ceric.16G027500 ID=Ceric.16G027500.1.v2.1 annot-version=v2.1

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.16G027500.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00089p00081270	PI,...	RNA biosynthesis.transcriptional activation.MADS box...	0.04	OrthoFinder output from all 47 species
AT2G22540	SVP, AGL22	K-box region and MADS-box transcription factor family protein	0.05	OrthoFinder output from all 47 species
AT3G02310	AGL4, SEP2	K-box region and MADS-box transcription factor family protein	0.02	OrthoFinder output from all 47 species
AT3G66656	AGL91	AGAMOUS-like 91	0.02	OrthoFinder output from all 47 species
AT5G15800	AGL2, SEP1	K-box region and MADS-box transcription factor family protein	0.04	OrthoFinder output from all 47 species
Ala_g20111	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene13944.t1	AGL18, Aspi01Gene13944	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0355.g066737	No alias	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g16031	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.12G051800.1	GL19, AGL19,...	MADS/AGL-type transcription factor & original...	0.09	OrthoFinder output from all 47 species
Dcu_g12724	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g14605	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g07427	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g15929	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21427	STK, AGL11	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009171001	SVP, AGL22	RNA biosynthesis.transcriptional activation.MADS box...	0.08	OrthoFinder output from all 47 species
GSVIVT01010521001	AGL9, SEP3	RNA biosynthesis.transcriptional activation.MADS box...	0.02	OrthoFinder output from all 47 species
GSVIVT01015641001	SVP, AGL22	RNA biosynthesis.transcriptional activation.MADS box...	0.04	OrthoFinder output from all 47 species
GSVIVT01018446001	AGL42	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01036549001	AGL7, AP1	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01038474001	AGL16	RNA biosynthesis.transcriptional activation.MADS box...	0.05	OrthoFinder output from all 47 species
LOC_Os01g69850.1	AGL79, LOC_Os01g69850	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os03g54170.1	AGL2, SEP1,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
LOC_Os04g38780.1	AGL16, LOC_Os04g38780	MADS-box transcription factor 27 OS=Oryza sativa subsp....	0.04	OrthoFinder output from all 47 species
MA_19296g0010	AGL9, SEP3	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_6544g0010	STK, AGL11	Floral homeotic protein AGAMOUS OS=Panax ginseng...	0.04	OrthoFinder output from all 47 species
Pir_g51490	AGL24	regulatory protein *(SVP/AGL24) of floral meristem...	0.03	OrthoFinder output from all 47 species
Pir_g54533	MAF2, AGL31	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g25142	AGL10, CAL1, CAL	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g25344	AGL30	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012202	No alias	MADS/AGL-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Sam_g36311	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g48748	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g48749	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g080785.1.1	AGL61, DIA,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Solyc04g076280.4.1	AGL24, Solyc04g076280	MADS-box protein SVP OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Spa_g02544	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g28690	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g55783	GL19, AGL19	MADS/AGL-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Tin_g23921	AGL7, AP1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e018811_P001	AGL14, Zm00001e018811	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Zm00001e030373_P001	AGL10, CAL1,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002487	TF_Kbox	88	168
IPR002100	TF_MADSbox	10	57

External Links

No external refs found!

Ceric.16G027500.1 (AGL16, Ceric.16G027500)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation