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  5. Ceric.15G061400.1

Ceric.15G061400.1 (QRT3, Ceric.15G061400)


Aliases : QRT3, Ceric.15G061400

Description : polygalacturonase *(QRT3) & original description: pacid=50639777 polypeptide=Ceric.15G061400.1.p locus=Ceric.15G061400 ID=Ceric.15G061400.1.v2.1 annot-version=v2.1


Gene families : OG0004265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.15G061400.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT4G20050 QRT3 Pectin lyase-like superfamily protein 0.06 OrthoFinder output from all 47 species
Aev_g16422 QRT3 polygalacturonase *(QRT3) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67503 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010377 QRT3 polygalacturonase *(QRT3) & original description: CDS=62-1624 0.04 OrthoFinder output from all 47 species
Dcu_g16097 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g31759 QRT3 polygalacturonase *(QRT3) & original description: none 0.09 OrthoFinder output from all 47 species
LOC_Os04g52320.1 QRT3, LOC_Os04g52320 polygalacturonase (QRT3) 0.03 OrthoFinder output from all 47 species
Len_g58007 QRT3 polygalacturonase *(QRT3) & original description: none 0.07 OrthoFinder output from all 47 species
Len_g58008 QRT3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_739517g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_917578g0010 QRT3 polygalacturonase (QRT3) 0.05 OrthoFinder output from all 47 species
Msp_g44003 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29972 QRT3 polygalacturonase *(QRT3) & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g13886 QRT3 polygalacturonase *(QRT3) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g068400.3.1 QRT3, Solyc02g068400 polygalacturonase (QRT3) 0.04 OrthoFinder output from all 47 species
Spa_g33866 QRT3 polygalacturonase *(QRT3) & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g43106 QRT3 polygalacturonase *(QRT3) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44469 QRT3 polygalacturonase *(QRT3) & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA

No InterPro domains available for this sequence

No external refs found!