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  5. Ceric.15G044200.1

Ceric.15G044200.1 (GRF3, AtGRF3, Ceric.15G044200)


Aliases : GRF3, AtGRF3, Ceric.15G044200

Description : component *(GRF) of GRF-GIF transcriptional complex & original description: pacid=50640650 polypeptide=Ceric.15G044200.1.p locus=Ceric.15G044200 ID=Ceric.15G044200.1.v2.1 annot-version=v2.1


Gene families : OG0000528 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000528_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.15G044200.1
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00189460 GRF4, AtGRF4,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
AMTR_s00048p00216350 GRF5, AtGRF5,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00196720 GRF1, AtGRF1,... RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
AT2G06200 GRF6, AtGRF6 growth-regulating factor 6 0.05 OrthoFinder output from all 47 species
AT2G22840 GRF1, AtGRF1 growth-regulating factor 1 0.05 OrthoFinder output from all 47 species
AT2G36400 GRF3, AtGRF3 growth-regulating factor 3 0.04 OrthoFinder output from all 47 species
AT3G13960 GRF5, AtGRF5 growth-regulating factor 5 0.03 OrthoFinder output from all 47 species
AT3G52910 GRF4, AtGRF4 growth-regulating factor 4 0.04 OrthoFinder output from all 47 species
AT5G53660 AtGRF7, GRF7 growth-regulating factor 7 0.03 OrthoFinder output from all 47 species
Aev_g20165 GRF2, AtGRF2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04374 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Als_g10136 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Als_g13520 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.06 OrthoFinder output from all 47 species
Als_g16124 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.06 OrthoFinder output from all 47 species
Als_g51481 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Aop_g11516 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene22371.t1 GRF5, AtGRF5,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35340.t1 GRF1, AtGRF1,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene37446.t1 GRF5, AtGRF5,... component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene47276.t1 GRF1, AtGRF1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene68335.t1 GRF1, AtGRF1,... component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene72796.t2 GRF2, AtGRF2,... component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene72796.t3 GRF2, AtGRF2,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0097.g043820 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Azfi_s0256.g060519 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Cba_g07600 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Cba_g09120 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Cba_g11628 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Cba_g12857 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Cba_g15543 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Ceric.15G046200.1 GRF1, AtGRF1,... component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Dac_g14130 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Dac_g23460 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.06 OrthoFinder output from all 47 species
Dcu_g14903 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Dcu_g16923 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g19232 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Dcu_g20310 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.03 OrthoFinder output from all 47 species
Dde_g38973 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01009299001 GRF1, AtGRF1 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
GSVIVT01016762001 GRF5, AtGRF5 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.03 OrthoFinder output from all 47 species
GSVIVT01019667001 AtGRF8, GRF8 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 OrthoFinder output from all 47 species
GSVIVT01024326001 GRF5, AtGRF5 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
GSVIVT01027535001 GRF9, AtGRF9 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.01 OrthoFinder output from all 47 species
GSVIVT01033800001 GRF3, AtGRF3 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.04 OrthoFinder output from all 47 species
GSVIVT01038629001 AtGRF7, GRF7 RNA biosynthesis.transcriptional activation.GRF-GIF... 0.02 OrthoFinder output from all 47 species
Gb_05477 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Gb_19288 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Gb_20400 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Gb_20443 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Gb_26136 GRF5, AtGRF5 component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g51970.1 GRF1, AtGRF1,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
LOC_Os04g48510.1 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Len_g36239 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
MA_111469g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.06 OrthoFinder output from all 47 species
MA_137877g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
MA_18836g0010 GRF5, AtGRF5 component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
MA_33661g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
MA_88101g0010 GRF1, AtGRF1 component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Mp8g16900.1 GRF2, AtGRF2 component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Nbi_g07300 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.07 OrthoFinder output from all 47 species
Nbi_g38721 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Ore_g20696 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Ore_g31052 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g06956 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.06 OrthoFinder output from all 47 species
Ppi_g30072 GRF3, AtGRF3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63627 GRF1, AtGRF1 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002301 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011382 No alias not classified & original description: CDS=103-1059 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019225 No alias not classified & original description: CDS=695-3535 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0120.g021398 GRF4, AtGRF4 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0161.g023900 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Solyc01g091540.3.1 GRF9, AtGRF9,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Solyc03g082430.1.1 AtGRF7, GRF7,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Solyc08g005430.3.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.05 OrthoFinder output from all 47 species
Solyc10g083510.2.1 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Solyc12g096070.2.1 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Spa_g17990 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Spa_g33786 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.04 OrthoFinder output from all 47 species
Tin_g11764 GRF5, AtGRF5 component *(GRF) of GRF-GIF transcriptional complex &... 0.05 OrthoFinder output from all 47 species
Tin_g32090 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g45753 GRF2, AtGRF2 component *(GRF) of GRF-GIF transcriptional complex &... 0.06 OrthoFinder output from all 47 species
Zm00001e015436_P001 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Zm00001e016029_P002 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Zm00001e023229_P001 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Zm00001e023769_P003 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.04 OrthoFinder output from all 47 species
Zm00001e029851_P005 GRF3, AtGRF3,... component GRF of GRF-GIF transcriptional complex 0.03 OrthoFinder output from all 47 species
Zm00001e036657_P001 GRF6, AtGRF6,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species
Zm00001e041573_P002 GRF5, AtGRF5,... component GRF of GRF-GIF transcriptional complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0031124 mRNA 3'-end processing IEP HCCA
InterPro domains Description Start Stop
IPR014977 WRC_dom 316 354
No external refs found!