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Aliases : Ceric.14G077400
Description : component *(PWR) of HDA9-PWR deacetylation complex & original description: pacid=50633013 polypeptide=Ceric.14G077400.1.p locus=Ceric.14G077400 ID=Ceric.14G077400.1.v2.1 annot-version=v2.1
Gene families : OG0001343 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001343_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.14G077400.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G52250 | No alias | Duplicated homeodomain-like superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| Aev_g04199 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11479 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g19843 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g27923 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.09 | OrthoFinder output from all 47 species | |
| Azfi_s0045.g029801 | No alias | lysine-rich arabinogalactan protein & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0118.g046625 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Cre06.g264400 | No alias | Chromatin organisation.histone modifications.histone... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20247 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g39968 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04157 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g41822 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.09 | OrthoFinder output from all 47 species | |
| Ehy_g17925 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01016309001 | No alias | Chromatin organisation.histone modifications.histone... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_13421 | No alias | component PWR of HDA9-PWR deacetylation complex | 0.03 | OrthoFinder output from all 47 species | |
| Len_g52352 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g59754 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g06278 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Lfl_g09069 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.06 | OrthoFinder output from all 47 species | |
| MA_104862g0010 | No alias | component PWR of HDA9-PWR deacetylation complex | 0.03 | OrthoFinder output from all 47 species | |
| MA_12404g0020 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_14319g0010 | No alias | component PWR of HDA9-PWR deacetylation complex | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g21450.1 | No alias | component PWR of HDA9-PWR deacetylation complex | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g19128 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g01519 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g06341 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g13639 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Pp3c11_8790V3.1 | Pp3c11_8790 | Duplicated homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g31999 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g08924 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Smo78396 | No alias | Chromatin organisation.histone modifications.histone... | 0.03 | OrthoFinder output from all 47 species | |
| Smo79245 | No alias | Chromatin organisation.histone modifications.histone... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g049120.4.1 | Solyc04g049120 | component PWR of HDA9-PWR deacetylation complex | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g15715 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g18287 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.06 | OrthoFinder output from all 47 species | |
| Tin_g24813 | No alias | component *(PWR) of HDA9-PWR deacetylation complex &... | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e027573_P003 | Zm00001e027573 | component PWR of HDA9-PWR deacetylation complex | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e029482_P006 | Zm00001e029482 | component PWR of HDA9-PWR deacetylation complex | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0017069 | snRNA binding | IEP | HCCA |
| MF | GO:0017070 | U6 snRNA binding | IEP | HCCA |
| MF | GO:0030623 | U5 snRNA binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |