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  5. Ceric.14G049800.1

Ceric.14G049800.1 (MDF, DOT2, Ceric.14G049800)


Aliases : MDF, DOT2, Ceric.14G049800

Description : not classified & original description: pacid=50634914 polypeptide=Ceric.14G049800.1.p locus=Ceric.14G049800 ID=Ceric.14G049800.1.v2.1 annot-version=v2.1


Gene families : OG0004143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004143_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G049800.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AT5G16780 MDF, DOT2 SART-1 family 0.06 OrthoFinder output from all 47 species
Adi_g055487 MDF, DOT2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g03521 MDF, DOT2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0107.g045171 MDF, DOT2 not classified & original description: CDS=1-2706 0.03 OrthoFinder output from all 47 species
Dcu_g07125 MDF, DOT2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_00217 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_12198 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os02g30730.2 MDF, DOT2, LOC_Os02g30730 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g10540 MDF, DOT2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp8g09130.1 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Ore_g19696 MDF, DOT2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo404232 MDF, DOT2 SART-1 family protein DOT2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc11g008460.1.1 MDF, DOT2, Solyc11g008460 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
Solyc11g008470.2.1 MDF, DOT2, Solyc11g008470 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e018582_P001 MDF, DOT2, Zm00001e018582 SART-1 family protein DOT2 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000398 mRNA splicing, via spliceosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR005011 SNU66/SART1 308 779
IPR005011 SNU66/SART1 795 841
No external refs found!