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  5. Ceric.14G034900.1

Ceric.14G034900.1 (EMB2762, Ceric.14G034900)


Aliases : EMB2762, Ceric.14G034900

Description : SSU processome assembly factor *(NOC4) & original description: pacid=50633340 polypeptide=Ceric.14G034900.1.p locus=Ceric.14G034900 ID=Ceric.14G034900.1.v2.1 annot-version=v2.1


Gene families : OG0004927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.14G034900.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g10397 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.02 OrthoFinder output from all 47 species
Cre01.g068377 EMB2762 Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Dac_g18421 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g03035 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.08 OrthoFinder output from all 47 species
Ehy_g13099 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os04g49580.1 EMB2762, LOC_Os04g49580 SSU processome assembly factor (NOC4) 0.04 OrthoFinder output from all 47 species
Len_g56436 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.03 OrthoFinder output from all 47 species
MA_10433722g0010 EMB2762 SSU processome assembly factor (NOC4) 0.04 OrthoFinder output from all 47 species
Mp1g06620.1 EMB2762 SSU processome assembly factor (NOC4) 0.04 OrthoFinder output from all 47 species
Msp_g38770 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.03 OrthoFinder output from all 47 species
Ore_g27976 EMB2762 SSU processome assembly factor *(NOC4) & original... 0.02 OrthoFinder output from all 47 species
Sam_g49646 No alias SSU processome assembly factor *(NOC4) & original... 0.02 OrthoFinder output from all 47 species
Solyc10g074560.2.1 EMB2762, Solyc10g074560 SSU processome assembly factor (NOC4) 0.04 OrthoFinder output from all 47 species
Zm00001e041386_P001 EMB2762, Zm00001e041386 SSU processome assembly factor (NOC4) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 350 530
No external refs found!