Aliases : DCL1, CAF, EMB76, SIN1, ATDCL1, EMB60, SUS1, ASU1, Ceric.14G005300
Description : endoribonuclease (DCL2) of transacting siRNA pathway & original description: pacid=50633609 polypeptide=Ceric.14G005300.1.p locus=Ceric.14G005300 ID=Ceric.14G005300.1.v2.1 annot-version=v2.1
Gene families : OG0000378 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000378_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.14G005300.1 | |
Cluster | HCCA: Cluster_115 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00016p00258500 | ATDCL2, DCL2,... | RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease | 0.03 | OrthoFinder output from all 47 species | |
AT3G43920 | ATDCL3, DCL3 | dicer-like 3 | 0.03 | OrthoFinder output from all 47 species | |
Cba_g01355 | DCL1, CAF,... | endoribonuclease (DCL2) of transacting siRNA pathway &... | 0.05 | OrthoFinder output from all 47 species | |
Dac_g32180 | DCL1, CAF,... | endoribonuclease *(DCL3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
MA_118446g0010 | ATDCL3, DCL3 | Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp.... | 0.04 | OrthoFinder output from all 47 species | |
Solyc10g006200.4.1 | ATRTL2, RTL2,... | Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
Spa_g09097 | DCL1, CAF,... | endoribonuclease component *(DCL1) of DCL1-HYL1 miRNA... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0004525 | ribonuclease III activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
BP | GO:0006396 | RNA processing | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |