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  5. Ceric.13G015300.1

Ceric.13G015300.1 (Ceric.13G015300)


Aliases : Ceric.13G015300

Description : component *(GCP2) of gamma-Tubulin ring complex & original description: pacid=50636920 polypeptide=Ceric.13G015300.1.p locus=Ceric.13G015300 ID=Ceric.13G015300.1.v2.1 annot-version=v2.1


Gene families : OG0004097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.13G015300.1

Target Alias Description ECC score Gene Family Method Actions
AT5G17410 No alias Spc97 / Spc98 family of spindle pole body (SBP) component 0.04 OrthoFinder output from all 47 species
Ala_g05311 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene54767.t1 Aspi01Gene54767 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54769.t1 Aspi01Gene54769 component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Cba_g66832 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.04 OrthoFinder output from all 47 species
Dcu_g04064 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.06 OrthoFinder output from all 47 species
Dde_g00847 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
GSVIVT01032444001 No alias Cytoskeleton.microtubular network.microtubule Tubulin... 0.04 OrthoFinder output from all 47 species
Lfl_g02177 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
MA_10272645g0010 No alias component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.02 OrthoFinder output from all 47 species
Mp1g08820.1 No alias component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.07 OrthoFinder output from all 47 species
Pir_g14780 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.04 OrthoFinder output from all 47 species
Ppi_g08933 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.03 OrthoFinder output from all 47 species
Smo78743 No alias Cytoskeleton.microtubular network.microtubule Tubulin... 0.03 OrthoFinder output from all 47 species
Solyc02g081460.4.1 Solyc02g081460 component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.03 OrthoFinder output from all 47 species
Tin_g06784 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.05 OrthoFinder output from all 47 species
Zm00001e041169_P001 Zm00001e041169 component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR041470 GCP_N 84 374
IPR040457 GCP_C 377 730
No external refs found!