1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.13G014400.1

Ceric.13G014400.1 (Ceric.13G014400)


Aliases : Ceric.13G014400

Description : large subunit beta of AP-4 vacuole cargo adaptor complex & original description: pacid=50636571 polypeptide=Ceric.13G014400.1.p locus=Ceric.13G014400 ID=Ceric.13G014400.1.v2.1 annot-version=v2.1


Gene families : OG0001612 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001612_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.13G014400.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00033810 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.vacuolar... 0.03 OrthoFinder output from all 47 species
AT4G23460 No alias Adaptin family protein 0.03 OrthoFinder output from all 47 species
AT5G11490 No alias adaptin family protein 0.05 OrthoFinder output from all 47 species
Ala_g15640 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.04 OrthoFinder output from all 47 species
Ala_g16231 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Als_g46996 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Aop_g04473 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020592.39 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre05.g234665 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.02 OrthoFinder output from all 47 species
Cre11.g478156 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 OrthoFinder output from all 47 species
Dcu_g01903 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.04 OrthoFinder output from all 47 species
Dcu_g07725 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Dde_g06808 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 OrthoFinder output from all 47 species
GSVIVT01035675001 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.04 OrthoFinder output from all 47 species
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
LOC_Os01g43630.1 LOC_Os01g43630 large subunit beta of AP-4 vacuole cargo adaptor complex 0.07 OrthoFinder output from all 47 species
LOC_Os03g23950.1 LOC_Os03g23950 large subunit beta of AP-1 trans-Golgi network cargo... 0.08 OrthoFinder output from all 47 species
Len_g12570 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species
Lfl_g02298 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Lfl_g05633 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.05 OrthoFinder output from all 47 species
MA_10429323g0010 No alias Beta-adaptin-like protein A OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.07 OrthoFinder output from all 47 species
Mp6g09050.1 No alias large subunit beta of AP-4 vacuole cargo adaptor complex 0.08 OrthoFinder output from all 47 species
Msp_g00711 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Nbi_g10984 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 OrthoFinder output from all 47 species
Ore_g04993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18294 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.02 OrthoFinder output from all 47 species
Ore_g36319 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.05 OrthoFinder output from all 47 species
Pir_g09755 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Pir_g11812 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013913 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Smo269763 No alias Vesicle trafficking.endomembrane trafficking.vacuolar... 0.05 OrthoFinder output from all 47 species
Solyc08g068210.3.1 Solyc08g068210 large subunit beta of AP-4 vacuole cargo adaptor complex 0.07 OrthoFinder output from all 47 species
Solyc08g081320.3.1 Solyc08g081320 large subunit beta of AP-1 trans-Golgi network cargo... 0.09 OrthoFinder output from all 47 species
Spa_g12477 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.03 OrthoFinder output from all 47 species
Spa_g16508 No alias large subunit beta of AP-4 vacuole cargo adaptor complex... 0.05 OrthoFinder output from all 47 species
Zm00001e001693_P001 Zm00001e001693 large subunit beta of AP-1 trans-Golgi network cargo... 0.05 OrthoFinder output from all 47 species
Zm00001e020411_P002 Zm00001e020411 large subunit beta of AP-4 vacuole cargo adaptor complex 0.04 OrthoFinder output from all 47 species
Zm00001e027916_P001 Zm00001e027916 large subunit beta of AP-4 vacuole cargo adaptor complex 0.05 OrthoFinder output from all 47 species
Zm00001e038184_P001 Zm00001e038184 large subunit beta of AP-1 trans-Golgi network cargo... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030117 membrane coat IEA Interproscan
CC GO:0030131 clathrin adaptor complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
CC GO:0017119 Golgi transport complex IEP HCCA
CC GO:0030014 CCR4-NOT complex IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 38 533
IPR015151 B-adaptin_app_sub_C 702 815
No external refs found!