Ceric.12G086800.1 (KU70, ATKU70, Ceric.12G086800)

Aliases : KU70, ATKU70, Ceric.12G086800

Description : component *(KU70) of Ku70-Ku80 helicase complex & original description: pacid=50602217 polypeptide=Ceric.12G086800.1.p locus=Ceric.12G086800 ID=Ceric.12G086800.1.v2.1 annot-version=v2.1

Gene families : OG0006457 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006457_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.12G086800.1

Target	Alias	Description	ECC score	Gene Family Method
Aob_g03274	KU70, ATKU70	component *(KU70) of Ku70-Ku80 helicase complex &...	0.03	OrthoFinder output from all 47 species
Dcu_g46115	KU70, ATKU70	component *(KU70) of Ku70-Ku80 helicase complex &...	0.03	OrthoFinder output from all 47 species
GSVIVT01031668001	KU70, ATKU70	DNA damage response.DNA repair mechanisms.nonhomologous...	0.02	OrthoFinder output from all 47 species
Tin_g02807	KU70, ATKU70	component *(KU70) of Ku70-Ku80 helicase complex &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003678	DNA helicase activity	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	None	Extended
BP	GO:0006302	double-strand break repair	None	Extended
BP	GO:0006303	double-strand break repair via nonhomologous end joining	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
MF	GO:0008094	ATP-dependent activity, acting on DNA	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140097	catalytic activity, acting on DNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA
CC	GO:0044599	AP-5 adaptor complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006164	Ku70/Ku80_beta-barrel_dom	285	480
IPR005161	Ku_N	37	278
IPR005160	Ku_C	495	578

External Links

No external refs found!

Ceric.12G086800.1 (KU70, ATKU70, Ceric.12G086800)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation