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  5. Ceric.12G057700.1

Ceric.12G057700.1 (ATDSS1(V), DSS1(V),...)


Aliases : ATDSS1(V), DSS1(V), Ceric.12G057700

Description : regulatory component *(DSS1/Sem1) of TREX-2 mRNP trafficking complex & original description: pacid=50601613 polypeptide=Ceric.12G057700.1.p locus=Ceric.12G057700 ID=Ceric.12G057700.1.v2.1 annot-version=v2.1


Gene families : OG0004437 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.12G057700.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Cre06.g263750 No alias RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Pp3c23_6370V3.1 Pp3c23_6370 No annotation 0.03 OrthoFinder output from all 47 species
Sam_g46524 No alias regulatory component *(DSS1/Sem1) of TREX-2 mRNP... 0.03 OrthoFinder output from all 47 species
Smo442197 ATDSS1(V), DSS1(V) RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Zm00001e025509_P001 ATDSS1(V),... component DSS1/Sem1 of TREX-2 mRNP trafficking complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!