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  5. Ceric.12G048700.1

Ceric.12G048700.1 (YLMG2, ATYLMG2,...)


Aliases : YLMG2, ATYLMG2, Ceric.12G048700

Description : not classified & original description: pacid=50602487 polypeptide=Ceric.12G048700.1.p locus=Ceric.12G048700 ID=Ceric.12G048700.1.v2.1 annot-version=v2.1


Gene families : OG0002185 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002185_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.12G048700.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00238310 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT5G21920 YLMG2, ATYLMG2 YGGT family protein 0.14 OrthoFinder output from all 47 species
Adi_g046778 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g08970 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04100 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g18000 YLMG2, ATYLMG2 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g07670 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02771 YLMG2, ATYLMG2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene69409.t1 YLMG2, ATYLMG2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G006500.1 YLMG1-2,... plastid-nucleoid partitioning factor *(YLMG1) & original... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020510.71 YLMG2, ATYLMG2 No description available 0.01 OrthoFinder output from all 47 species
Cre02.g080250 YLMG1-2, ATYLMG1-2 No description available 0.03 OrthoFinder output from all 47 species
Cre12.g557050 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
Cre16.g684300 YLMG2, ATYLMG2 No description available 0.06 OrthoFinder output from all 47 species
Dac_g31838 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09359 YLMG2, ATYLMG2 not classified & original description: none 0.19 OrthoFinder output from all 47 species
Dde_g10748 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02100 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01035473001 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_33767 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
LOC_Os03g08080.1 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.15 OrthoFinder output from all 47 species
Len_g05180 YLMG2, ATYLMG2 not classified & original description: none 0.16 OrthoFinder output from all 47 species
Len_g18155 emb1990,... plastid-nucleoid partitioning factor *(YLMG1) & original... 0.08 OrthoFinder output from all 47 species
Lfl_g05213 YLMG2, ATYLMG2 not classified & original description: none 0.11 OrthoFinder output from all 47 species
MA_9458287g0010 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g13060.1 YLMG2, ATYLMG2 YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.15 OrthoFinder output from all 47 species
Msp_g10281 YLMG2, ATYLMG2 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g11258 YLMG2, ATYLMG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g18597 YLMG2, ATYLMG2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18598 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g18599 YLMG2, ATYLMG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11582 YLMG2, ATYLMG2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g31514 YLMG2, ATYLMG2 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Ppi_g58200 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014630 YLMG1-2, ATYLMG1-2 plastid-nucleoid partitioning factor *(YLMG1) & original... 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016203 YLMG2, ATYLMG2 not classified & original description: CDS=1-753 0.07 OrthoFinder output from all 47 species
Sam_g06521 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Solyc08g061630.3.1 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.13 OrthoFinder output from all 47 species
Spa_g10431 YLMG2, ATYLMG2 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Tin_g00523 YLMG2, ATYLMG2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e000570_P001 YLMG2, ATYLMG2,... YlmG homolog protein 2, chloroplastic OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Zm00001e038876_P002 Zm00001e038876 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030091 protein repair IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003425 CCB3/YggT 130 194
No external refs found!