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  5. Ceric.12G028700.1

Ceric.12G028700.1 (NFB01, NFB1, MUB3.9,...)


Aliases : NFB01, NFB1, MUB3.9, FAS2, Ceric.12G028700

Description : component *(CAF1b/FAS2) of CAF1 histone chaperone complex & original description: pacid=50600608 polypeptide=Ceric.12G028700.1.p locus=Ceric.12G028700 ID=Ceric.12G028700.1.v2.1 annot-version=v2.1


Gene families : OG0006619 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006619_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.12G028700.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00116490 NFB01, NFB1,... Chromatin organisation.histone chaperone activities.CAF1... 0.03 OrthoFinder output from all 47 species
AT5G64630 NFB01, NFB1, MUB3.9, FAS2 Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aop_g38719 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020629.12 NFB01, NFB1, MUB3.9, FAS2 Chromatin assembly factor 1 subunit FAS2 homolog... 0.03 OrthoFinder output from all 47 species
GSVIVT01026512001 NFB01, NFB1, MUB3.9, FAS2 Chromatin organisation.histone chaperone activities.CAF1... 0.03 OrthoFinder output from all 47 species
Len_g36215 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.04 OrthoFinder output from all 47 species
MA_6422g0020 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.03 OrthoFinder output from all 47 species
Mp4g02980.1 NFB01, NFB1, MUB3.9, FAS2 component CAF1b/FAS2 of CAF1 histone chaperone complex 0.06 OrthoFinder output from all 47 species
Nbi_g23632 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.05 OrthoFinder output from all 47 species
Solyc11g005800.2.1 NFB01, NFB1,... component CAF1b/FAS2 of CAF1 histone chaperone complex 0.03 OrthoFinder output from all 47 species
Spa_g51583 NFB01, NFB1, MUB3.9, FAS2 component *(CAF1b/FAS2) of CAF1 histone chaperone... 0.05 OrthoFinder output from all 47 species
Zm00001e029144_P001 NFB01, NFB1,... component CAF1b/FAS2 of CAF1 histone chaperone complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 108 144
IPR001680 WD40_repeat 64 94
IPR001680 WD40_repeat 356 381
IPR001680 WD40_repeat 148 186
IPR001680 WD40_repeat 10 45
No external refs found!