Ceric.10G056100.1 (PLT2, Ceric.10G056100)

Aliases : PLT2, Ceric.10G056100

Description : AP2-type transcription factor *(WRI/AIL) & original description: pacid=50612903 polypeptide=Ceric.10G056100.1.p locus=Ceric.10G056100 ID=Ceric.10G056100.1.v2.1 annot-version=v2.1

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.10G056100.1

Target	Alias	Description	ECC score	Gene Family Method
AT5G10510	PLT3, AIL6	AINTEGUMENTA-like 6	0.01	OrthoFinder output from all 47 species
Ala_g30004	ADAP	RAM1-dependent transcription factor *(WRI5) & original...	0.02	OrthoFinder output from all 47 species
Ala_g33374	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g21593	No alias	RAM1-dependent transcription factor *(WRI5) & original...	0.01	OrthoFinder output from all 47 species
Ceric.10G056200.1	PLT2, Ceric.10G056200	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Dcu_g33754	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Dcu_g41387	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
GSVIVT01025307001	PLT2	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.01	OrthoFinder output from all 47 species
LOC_Os01g67410.1	PLT1, LOC_Os01g67410	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
LOC_Os02g40070.1	PLT2, LOC_Os02g40070	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
LOC_Os03g07940.1	LOC_Os03g07940	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
LOC_Os04g42570.1	PLT1, LOC_Os04g42570	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os06g44750.1	AIL5, EMK, CHO1,...	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
LOC_Os11g19060.1	BBM, LOC_Os11g19060	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Lfl_g17116	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g29068	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
MA_113625g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_196219g0010	AIL5, EMK, CHO1	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
MA_86195g0010	PLT2	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
Nbi_g10303	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.01	OrthoFinder output from all 47 species
Solyc11g008560.2.1	BBM, Solyc11g008560	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc11g061750.2.1	PLT2, Solyc11g061750	transcription factor (AP2)	0.01	OrthoFinder output from all 47 species
Spa_g28499	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g38473	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Spa_g38474	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Zm00001e015104_P001	PLT2, Zm00001e015104	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Zm00001e018951_P001	PLT2, Zm00001e018951	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
CC	GO:0005840	ribosome	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	198	247

External Links

No external refs found!

Ceric.10G056100.1 (PLT2, Ceric.10G056100)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation