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  5. Ceric.10G052200.1

Ceric.10G052200.1 (SPL12, Ceric.10G052200)


Aliases : SPL12, Ceric.10G052200

Description : SBP-type transcription factor & original description: pacid=50612533 polypeptide=Ceric.10G052200.1.p locus=Ceric.10G052200 ID=Ceric.10G052200.1.v2.1 annot-version=v2.1


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.10G052200.1

Target Alias Description ECC score Gene Family Method Actions
AT1G76580 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 OrthoFinder output from all 47 species
Adi_g113329 SPL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15978 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31923 SPL1R2, ATSPL14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08355 No alias SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g13220 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50902 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15748 No alias SBP-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g08894 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13310 SPL12 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g34153 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26324 SPL1 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12976 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003571_P002 Zm00001e003571 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e006252_P001 SPL1, Zm00001e006252 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 148 221
No external refs found!