Ceric.10G031700.1 (KNAT3, Ceric.10G031700)

Aliases : KNAT3, Ceric.10G031700

Description : KNOX-type transcription factor & original description: pacid=50612218 polypeptide=Ceric.10G031700.1.p locus=Ceric.10G031700 ID=Ceric.10G031700.1.v2.1 annot-version=v2.1

Gene families : OG0000252 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.10G031700.1
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00023p00178300	KNAT7, IXR11,...	Homeobox protein HD1 OS=Brassica napus	0.02	OrthoFinder output from all 47 species
AT1G62360	BUM1, SHL, STM,...	KNOX/ELK homeobox transcription factor	0.04	OrthoFinder output from all 47 species
Adi_g019966	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g060986	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g04111	KNAT4	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g13164	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g21619	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Als_g05650	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g17223	KNAT3	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g08816	KNAT3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g70104	KNAT3	KNOX-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aspi01Gene63424.t1	KNAT3, Aspi01Gene63424	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0049.g030818	KNAT3	KNOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Azfi_s0350.g066569	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: CDS=1-1488	0.03	OrthoFinder output from all 47 species
Dcu_g11389	KNAT3	KNOX-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g48747	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01004811001	BUM1, SHL, STM,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
GSVIVT01009273001	BP, BP1, KNAT1	RNA biosynthesis.transcriptional activation.HB...	0.05	OrthoFinder output from all 47 species
GSVIVT01013790001	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
GSVIVT01019880001	KNAT7, IXR11	RNA biosynthesis.transcriptional activation.HB...	0.02	OrthoFinder output from all 47 species
GSVIVT01031241001	KNAT6, KNAT6L, KNAT6S	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
Gb_00573	BUM1, SHL, STM,...	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species
LOC_Os03g03164.2	KNAT7, IXR11,...	transcription factor (KNOX)	0.05	OrthoFinder output from all 47 species
LOC_Os03g56140.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Len_g56773	KNAT3	KNOX-type transcription factor & original description: none	0.07	OrthoFinder output from all 47 species
Lfl_g06541	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g30292	KNAT6, KNAT6L, KNAT6S	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10428500g0010	KNAT3	transcription factor (KNOX)	0.04	OrthoFinder output from all 47 species
Msp_g44272	KNAT3	KNOX-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Nbi_g05715	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g27135	KNAT3	KNOX-type transcription factor & original description: none	0.13	OrthoFinder output from all 47 species
Ore_g19225	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25139	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g25497	KNAT4	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g25530	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g31220	KNAT4	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g35975	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g41824	BP, BP1, KNAT1	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g62008	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c18_18750V3.1	Pp3c18_18750	KNOTTED1-like homeobox gene 6	0.01	OrthoFinder output from all 47 species
Pp3c19_5610V3.1	Pp3c19_5610	No annotation	0.03	OrthoFinder output from all 47 species
Pp3c5_26440V3.1	KNAT3, Pp3c5_26440	KNOTTED1-like homeobox gene 3	0.02	OrthoFinder output from all 47 species
Ppi_g15325	KNAT4	KNOX-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g16367	KNAT3	KNOX-type transcription factor & original description: none	0.11	OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005308	BUM1, SHL, STM,...	KNOX-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018782	KNAT2, ATK1	not classified & original description: CDS=1-1071	0.03	OrthoFinder output from all 47 species
Solyc04g077210.3.1	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Solyc08g041820.3.1	KNAT3, Solyc08g041820	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Solyc12g010410.3.1	KNAT4, Solyc12g010410	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Spa_g22911	KNAT3	KNOX-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g29512	BUM1, SHL, STM,...	KNOX-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g47799	KNAT3	KNOX-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Spa_g47800	KNAT4	KNOX-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g45916	KNAT3	KNOX-type transcription factor & original description: none	0.1	OrthoFinder output from all 47 species
Zm00001e000173_P003	KNAT7, IXR11,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species
Zm00001e005170_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e005547_P001	BP, BP1, KNAT1,...	transcription factor (KNOX)	0.02	OrthoFinder output from all 47 species
Zm00001e039044_P001	KNAT7, IXR11,...	transcription factor (KNOX)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	HCCA
MF	GO:0016843	amine-lyase activity	IEP	HCCA
MF	GO:0016844	strictosidine synthase activity	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
BP	GO:0035434	copper ion transmembrane transport	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005540	KNOX1	152	190
IPR005541	KNOX2	214	263
IPR008422	Homeobox_KN_domain	374	413

External Links

No external refs found!

Ceric.10G031700.1 (KNAT3, Ceric.10G031700)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation