1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.10G007100.1

Ceric.10G007100.1 (Ceric.10G007100)


Aliases : Ceric.10G007100

Description : regulatory protein of RNA homeostasis & original description: pacid=50612912 polypeptide=Ceric.10G007100.1.p locus=Ceric.10G007100 ID=Ceric.10G007100.1.v2.1 annot-version=v2.1


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.10G007100.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00144160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
AT1G32360 No alias Zinc finger (CCCH-type) family protein 0.03 OrthoFinder output from all 47 species
Adi_g106787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01754 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0130.g049031 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Cba_g33461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74371 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17295 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Gb_34650 No alias C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Len_g04738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16999 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Lfl_g22114 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59910 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Pnu_g08513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08692 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022775 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sam_g09323 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g35335 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Spa_g55076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0050290 sphingomyelin phosphodiesterase D activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 258 280
IPR000571 Znf_CCCH 320 345
IPR000571 Znf_CCCH 172 197
No external refs found!