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  5. Ceric.09G053600.1

Ceric.09G053600.1 (PSB29, THF1, Ceric.09G053600)


Aliases : PSB29, THF1, Ceric.09G053600

Description : regulatory protein *(THF1) of thylakoid biogenesis & original description: pacid=50587633 polypeptide=Ceric.09G053600.1.p locus=Ceric.09G053600 ID=Ceric.09G053600.1.v2.1 annot-version=v2.1


Gene families : OG0005582 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005582_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G053600.1
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT2G20890 PSB29, THF1 photosystem II reaction center PSB29 protein 0.06 OrthoFinder output from all 47 species
Adi_g049478 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.09 OrthoFinder output from all 47 species
Aev_g07010 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Ala_g10607 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.07 OrthoFinder output from all 47 species
Als_g10332 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.05 OrthoFinder output from all 47 species
Aob_g08924 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.07 OrthoFinder output from all 47 species
Aop_g10796 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene22706.t1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid bioGenesis &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene25675.t1 PSB29, THF1,... regulatory protein *(THF1) of thylakoid bioGenesis &... 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014961 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Cba_g15644 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Cre13.g562850 PSB29, THF1 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dac_g11041 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Dcu_g05354 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.08 OrthoFinder output from all 47 species
Dde_g05773 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Ehy_g09593 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.05 OrthoFinder output from all 47 species
Ehy_g18167 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.18 OrthoFinder output from all 47 species
GSVIVT01029990001 PSB29, THF1 Photosynthesis.photophosphorylation.photosystem... 0.09 OrthoFinder output from all 47 species
LOC_Os07g37250.1 PSB29, THF1,... Psb29 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Len_g11639 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.11 OrthoFinder output from all 47 species
Lfl_g00738 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Nbi_g04688 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.06 OrthoFinder output from all 47 species
Pir_g02490 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0242.g026645 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.07 OrthoFinder output from all 47 species
Sam_g09897 No alias regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Sam_g29483 No alias regulatory protein *(THF1) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Spa_g08315 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.08 OrthoFinder output from all 47 species
Tin_g03106 PSB29, THF1 regulatory protein *(THF1) of thylakoid biogenesis &... 0.05 OrthoFinder output from all 47 species
Zm00001e035236_P001 PSB29, THF1,... Psb29 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010207 photosystem II assembly IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR017499 Thf1 71 275
No external refs found!