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  5. Ceric.09G053400.1

Ceric.09G053400.1 (DDL, Ceric.09G053400)


Aliases : DDL, Ceric.09G053400

Description : pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA biogenesis pathway & original description: pacid=50587089 polypeptide=Ceric.09G053400.1.p locus=Ceric.09G053400 ID=Ceric.09G053400.1.v2.1 annot-version=v2.1


Gene families : OG0005544 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.09G053400.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g46219 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.02 OrthoFinder output from all 47 species
Cba_g33075 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.03 OrthoFinder output from all 47 species
Cre09.g390430 DDL RNA biosynthesis.RNA polymerase II-dependent... 0.02 OrthoFinder output from all 47 species
LOC_Os05g46780.1 DDL, LOC_Os05g46780 pri-miRNA-DCL1 association factor (DAWDLE) 0.03 OrthoFinder output from all 47 species
Mp7g08770.1 DDL pri-miRNA-DCL1 association factor (DAWDLE) 0.02 OrthoFinder output from all 47 species
Ore_g18493 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.02 OrthoFinder output from all 47 species
Solyc10g006390.3.1 DDL, Solyc10g006390 pri-miRNA-DCL1 association factor (DAWDLE) 0.05 OrthoFinder output from all 47 species
Spa_g49852 DDL pri-miRNA-DCL1 association factor *(DAWDLE) of miRNA... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000253 FHA_dom 327 406
No external refs found!