Ceric.08G069700.1 (Ceric.08G069700)

Aliases : Ceric.08G069700

Description : translation peptide chain release factor *(PrfB) & original description: pacid=50637894 polypeptide=Ceric.08G069700.1.p locus=Ceric.08G069700 ID=Ceric.08G069700.1.v2.1 annot-version=v2.1

Gene families : OG0002101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002101_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.08G069700.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00057p00025530	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Adi_g040965	ATPRFB, HCF109	translation peptide chain release factor *(PrfB) &...	0.02	OrthoFinder output from all 47 species
Adi_g112610	No alias	translation peptide chain release factor *(PrfB) &...	0.03	OrthoFinder output from all 47 species
Aob_g08393	No alias	translation peptide chain release factor *(PrfB) &...	0.04	OrthoFinder output from all 47 species
GSVIVT01031232001	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Gb_09148	No alias	PrfB-type translation peptide chain release factor	0.02	OrthoFinder output from all 47 species
Smo75160	No alias	Protein biosynthesis.organelle translation...	0.03	OrthoFinder output from all 47 species
Solyc01g100420.3.1	Solyc01g100420	PrfB-type translation peptide chain release factor	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003747	translation release factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006415	translational termination	IEA	Interproscan
MF	GO:0008079	translation termination factor activity	None	Extended
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022411	cellular component disassembly	None	Extended
BP	GO:0032984	protein-containing complex disassembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0016741	transferase activity, transferring one-carbon groups	IEP	HCCA
MF	GO:0019899	enzyme binding	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0031267	small GTPase binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0051020	GTPase binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005139	PCRF	121	308
IPR000352	Pep_chain_release_fac_I	318	426

External Links

No external refs found!

Ceric.08G069700.1 (Ceric.08G069700)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation