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Aliases : TRO, Ceric.08G063000
Description : component *(TRO/ASH2) of COMPASS histone trimethylation complex & original description: pacid=50637965 polypeptide=Ceric.08G063000.1.p locus=Ceric.08G063000 ID=Ceric.08G063000.1.v2.1 annot-version=v2.1
Gene families : OG0002961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002961_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ceric.08G063000.1 | |
| Cluster | HCCA: Cluster_121 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G51450 | TRO | TRAUCO | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g11774 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70704 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene24800.t1 | TRO, Aspi01Gene24800 | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g13609 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04864 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.08 | OrthoFinder output from all 47 species | |
| GSVIVT01025234001 | TRO | Chromatin organisation.histone modifications.histone... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13314 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.03 | OrthoFinder output from all 47 species | |
| MA_1873g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g08520.1 | TRO | component ASH2 of COMPASS histone trimethylation complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g19005 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g38049 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g18675 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g065370.3.1 | TRO, Solyc11g065370 | component ASH2 of COMPASS histone trimethylation complex | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g04568 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17321 | TRO | component *(TRO/ASH2) of COMPASS histone trimethylation... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009161_P001 | TRO, Zm00001e009161 | component ASH2 of COMPASS histone trimethylation complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003877 | SPRY_dom | 855 | 927 |
| No external refs found! |