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  5. Ceric.08G043600.1

Ceric.08G043600.1 (Ceric.08G043600)


Aliases : Ceric.08G043600

Description : translation initiation factor *(IF-2) & original description: pacid=50638294 polypeptide=Ceric.08G043600.1.p locus=Ceric.08G043600 ID=Ceric.08G043600.1.v2.1 annot-version=v2.1


Gene families : OG0001742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.08G043600.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g02579 No alias translation initiation factor *(IF-2) & original... 0.02 OrthoFinder output from all 47 species
Aob_g17529 No alias translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Aop_g12340 No alias translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
Cre08.g376800 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Dcu_g09850 No alias translation initiation factor *(IF-2) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os09g34010.1 LOC_Os09g34010 IF-2 translation initiation factor 0.04 OrthoFinder output from all 47 species
MA_27343g0010 No alias IF-2 translation initiation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006368 transcription elongation by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
CC GO:0008023 transcription elongation factor complex IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
CC GO:0016593 Cdc73/Paf1 complex IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0030684 preribosome IEP HCCA
CC GO:0032040 small-subunit processome IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR023115 TIF_IF2_dom3 505 609
IPR000795 T_Tr_GTP-bd_dom 196 352
No external refs found!