Ceric.08G017800.1 (ATHB1, ATHB-1, HAT5,...)

Aliases : ATHB1, ATHB-1, HAT5, HD-ZIP-1, HB-1, Ceric.08G017800

Description : HD-ZIP I/II-type transcription factor & original description: pacid=50637976 polypeptide=Ceric.08G017800.1.p locus=Ceric.08G017800 ID=Ceric.08G017800.1.v2.1 annot-version=v2.1

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.08G017800.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00253290	ATHB13,...	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
AT5G03790	HB51, ATHB51, LMI1	homeobox 51	0.04	OrthoFinder output from all 47 species
Adi_g014408	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0006.g009635	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Azfi_s0104.g044792	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
GSVIVT01009083001	ATHB16, HB16, ATHB-16	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
GSVIVT01032491001	ATHB1, ATHB-1,...	RNA biosynthesis.transcriptional activation.HB...	0.06	OrthoFinder output from all 47 species
Gb_39722	ATHB13	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
LOC_Os10g26500.1	ATHB13, LOC_Os10g26500	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Len_g29447	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Ore_g07340	HB6, ATHB6	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sam_g10250	No alias	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc05g007180.3.1	ATHB13, Solyc05g007180	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Solyc11g010270.2.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species
Tin_g09467	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.09	OrthoFinder output from all 47 species
Zm00001e000659_P001	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.05	OrthoFinder output from all 47 species
Zm00001e010218_P001	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	341	375
IPR001356	Homeobox_dom	286	339

External Links

No external refs found!

Ceric.08G017800.1 (ATHB1, ATHB-1, HAT5,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation