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  5. Ceric.07G044000.1

Ceric.07G044000.1 (Ceric.07G044000)


Aliases : Ceric.07G044000

Description : not classified & original description: pacid=50627215 polypeptide=Ceric.07G044000.1.p locus=Ceric.07G044000 ID=Ceric.07G044000.1.v2.1 annot-version=v2.1


Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.07G044000.1
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00164270 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
AT3G10650 No alias BEST Arabidopsis thaliana protein match is:... 0.07 OrthoFinder output from all 47 species
Ala_g06113 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.11 OrthoFinder output from all 47 species
Als_g14618 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Als_g31899 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Aop_g08994 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Aop_g17818 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0052.g031533 No alias not classified & original description: CDS=475-3180 0.05 OrthoFinder output from all 47 species
Azfi_s2690.g112655 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.07 OrthoFinder output from all 47 species
Azfi_s2690.g112658 No alias not classified & original description: CDS=1-327 0.03 OrthoFinder output from all 47 species
Dcu_g05781 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.06 OrthoFinder output from all 47 species
Dcu_g49204 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.14 OrthoFinder output from all 47 species
Ehy_g04036 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ehy_g26942 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.08 OrthoFinder output from all 47 species
GSVIVT01034601001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.09 OrthoFinder output from all 47 species
Gb_18080 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.1 OrthoFinder output from all 47 species
Gb_35130 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Len_g30747 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.1 OrthoFinder output from all 47 species
Lfl_g14234 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.14 OrthoFinder output from all 47 species
MA_87384g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp3g05990.1 No alias NUP1/NUP136 nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Msp_g14916 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Nbi_g09860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43950 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.08 OrthoFinder output from all 47 species
Ore_g28862 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g10463 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.06 OrthoFinder output from all 47 species
Pir_g66188 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.05 OrthoFinder output from all 47 species
Ppi_g02341 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012850 No alias not classified & original description: CDS=3-2681 0.06 OrthoFinder output from all 47 species
Sam_g13887 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19954 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.06 OrthoFinder output from all 47 species
Solyc05g055110.4.1 Solyc05g055110 NUP1/NUP136 nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Solyc11g006390.2.1 Solyc11g006390 NUP1/NUP136 nucleoporin of nuclear pore complex 0.08 OrthoFinder output from all 47 species
Spa_g06717 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.04 OrthoFinder output from all 47 species
Spa_g07621 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.03 OrthoFinder output from all 47 species
Tin_g06136 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.08 OrthoFinder output from all 47 species
Zm00001e005928_P001 Zm00001e005928 NUP1/NUP136 nucleoporin of nuclear pore complex 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!