1. Home
  2. Species
  3. Ceratopteris richardii
  4. Sequence
  5. Ceric.07G036200.1

Ceric.07G036200.1 (ATSRL1, Ceric.07G036200)


Aliases : ATSRL1, Ceric.07G036200

Description : not classified & original description: pacid=50627179 polypeptide=Ceric.07G036200.1.p locus=Ceric.07G036200 ID=Ceric.07G036200.1.v2.1 annot-version=v2.1


Gene families : OG0003543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003543_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.07G036200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00011550 ATSRL1,... Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g27184 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26698.t1 ATSRL1, Aspi01Gene26698 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02827 ATSRL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01026312001 ATSRL1 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Lfl_g04762 ATSRL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20398 ATSRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g014560.4.1 ATSRL1, Solyc04g014560 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g19184 ATSRL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036528_P001 ATSRL1, Zm00001e036528 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034457 Mpp10 complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005037 PRP38 11 161
No external refs found!