Aliases : EBP1, ATEBP1, ATG2, Ceric.06G082300
Description : pre-60S ribosomal-subunit proteome export factor *(ARX1) & original description: pacid=50620022 polypeptide=Ceric.06G082300.1.p locus=Ceric.06G082300 ID=Ceric.06G082300.1.v2.1 annot-version=v2.1
Gene families : OG0003188 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003188_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Ceric.06G082300.1 | |
Cluster | HCCA: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00167240 | EBP1, ATEBP1,... | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum | 0.04 | OrthoFinder output from all 47 species | |
AT3G51800 | EBP1, ATEBP1, ATG2 | metallopeptidase M24 family protein | 0.05 | OrthoFinder output from all 47 species | |
Ala_g08839 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.05 | OrthoFinder output from all 47 species | |
Azfi_s0019.g015328 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.17 | OrthoFinder output from all 47 species | |
Cba_g06999 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g11791 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00000553.33 | EBP1, ATEBP1, ATG2 | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum | 0.04 | OrthoFinder output from all 47 species | |
Cre13.g604650 | EBP1, ATEBP1, ATG2 | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum | 0.03 | OrthoFinder output from all 47 species | |
Dac_g03227 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.06 | OrthoFinder output from all 47 species | |
Ehy_g08408 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01003934001 | EBP1, ATEBP1, ATG2 | ERBB-3 BINDING PROTEIN 1 OS=Solanum tuberosum | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os05g28280.1 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.09 | OrthoFinder output from all 47 species | |
Len_g16054 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.04 | OrthoFinder output from all 47 species | |
MA_10426694g0010 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal subunit export factor (ARX1) | 0.07 | OrthoFinder output from all 47 species | |
Mp8g14760.1 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal subunit export factor (ARX1) | 0.06 | OrthoFinder output from all 47 species | |
Msp_g09415 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g02808 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.05 | OrthoFinder output from all 47 species | |
Ore_g11150 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g20368 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g19099 | No alias | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.11 | OrthoFinder output from all 47 species | |
Solyc06g007200.4.1 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g082090.4.1 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.14 | OrthoFinder output from all 47 species | |
Spa_g54762 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.19 | OrthoFinder output from all 47 species | |
Tin_g06544 | EBP1, ATEBP1, ATG2 | pre-60S ribosomal-subunit proteome export factor *(ARX1)... | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e027220_P002 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e031491_P001 | EBP1, ATEBP1,... | pre-60S ribosomal subunit export factor (ARX1) | 0.07 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
MF | GO:0003924 | GTPase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0005525 | GTP binding | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006364 | rRNA processing | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006414 | translational elongation | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
CC | GO:0015934 | large ribosomal subunit | IEP | HCCA |
BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
BP | GO:0019538 | protein metabolic process | IEP | HCCA |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
BP | GO:0034470 | ncRNA processing | IEP | HCCA |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
CC | GO:0044391 | ribosomal subunit | IEP | HCCA |
MF | GO:0045182 | translation regulator activity | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000994 | Pept_M24 | 23 | 226 |
No external refs found! |