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  5. Ceric.06G021200.1

Ceric.06G021200.1 (Ceric.06G021200)


Aliases : Ceric.06G021200

Description : E3 ubiquitin ligase & original description: pacid=50620402 polypeptide=Ceric.06G021200.1.p locus=Ceric.06G021200 ID=Ceric.06G021200.1.v2.1 annot-version=v2.1


Gene families : OG0001060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.06G021200.1

Target Alias Description ECC score Gene Family Method Actions
AT5G01520 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
Dde_g47270 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52638 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e010920_P002 Zm00001e010920 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e041948_P002 Zm00001e041948 RING-HC-class E3 ligase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 151 190
No external refs found!