Ceric.05G042100.1 (RPS8, Ceric.05G042100)

Aliases : RPS8, Ceric.05G042100

Description : component *(uS8c) of small plastid ribosomal-subunit proteome & original description: pacid=50577630 polypeptide=Ceric.05G042100.1.p locus=Ceric.05G042100 ID=Ceric.05G042100.1.v2.1 annot-version=v2.1

Gene families : OG0009333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009333_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ceric.05G042100.1
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
ATCG00770	RPS8	ribosomal protein S8	0.14	OrthoFinder output from all 47 species
Aev_g03624	RPS8	component *(uS8c) of small plastid ribosomal-subunit...	0.16	OrthoFinder output from all 47 species
GSVIVT01014320001	No alias	30S ribosomal protein S8, chloroplastic OS=Vitis vinifera	0.03	OrthoFinder output from all 47 species
LOC_Os04g16832.1	RPS8, LOC_Os04g16832	component psRPS8 of small ribosomal subunit proteome	0.18	OrthoFinder output from all 47 species
LOC_Os05g22718.1	RPS8, LOC_Os05g22718	component psRPS8 of small ribosomal subunit proteome	0.18	OrthoFinder output from all 47 species
LOC_Os08g15278.1	RPS8, LOC_Os08g15278	component psRPS8 of small ribosomal subunit proteome	0.18	OrthoFinder output from all 47 species
Mpzg00740.1	RPS8	component psRPS8 of small ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Nbi_g03453	RPS8	component *(uS8c) of small plastid ribosomal-subunit...	0.12	OrthoFinder output from all 47 species
Pir_g10782	RPS8	component *(uS8c) of small plastid ribosomal-subunit...	0.17	OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023358	RPS8	not classified & original description: CDS=1-339	0.03	OrthoFinder output from all 47 species
Smo137784	RPS8	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Solyc00g500031.1.1	RPS8, Solyc00g500031	component psRPL14 of large ribosomal subunit proteome....	0.09	OrthoFinder output from all 47 species
Solyc00g500076.1.1	RPS8, Solyc00g500076	component psRPL14 of large ribosomal subunit proteome....	0.09	OrthoFinder output from all 47 species
Tin_g37385	RPS8	component *(uS8c) of small plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006066	alcohol metabolic process	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006766	vitamin metabolic process	IEP	HCCA
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	HCCA
BP	GO:0006772	thiamine metabolic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
BP	GO:0009110	vitamin biosynthetic process	IEP	HCCA
BP	GO:0009228	thiamine biosynthetic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0034308	primary alcohol metabolic process	IEP	HCCA
BP	GO:0034309	primary alcohol biosynthetic process	IEP	HCCA
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	HCCA
BP	GO:0042723	thiamine-containing compound metabolic process	IEP	HCCA
BP	GO:0042724	thiamine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046165	alcohol biosynthetic process	IEP	HCCA
MF	GO:0051536	iron-sulfur cluster binding	IEP	HCCA
MF	GO:0051540	metal cluster binding	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000630	Ribosomal_S8	2	110

External Links

No external refs found!

Ceric.05G042100.1 (RPS8, Ceric.05G042100)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation