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  5. Ceric.05G027300.1

Ceric.05G027300.1 (Ceric.05G027300)


Aliases : Ceric.05G027300

Description : EC_3.2 glycosylase & original description: pacid=50578512 polypeptide=Ceric.05G027300.1.p locus=Ceric.05G027300 ID=Ceric.05G027300.1.v2.1 annot-version=v2.1


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G027300.1

Target Alias Description ECC score Gene Family Method Actions
AT1G80170 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g60124 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.38G004300.1 Ceric.38G004300 EC_3.2 glycosylase & original description:... 0.05 OrthoFinder output from all 47 species
Ehy_g04883 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g11760.1 QRT2, LOC_Os03g11760 Polygalacturonase OS=Actinidia deliciosa... 0.02 OrthoFinder output from all 47 species
MA_96282g0010 ADPG1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc01g100980.4.1 Solyc01g100980 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc03g116500.4.1 Solyc03g116500 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g39658 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e027720_P001 Zm00001e027720 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Zm00001e032294_P001 Zm00001e032294 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 104 431
No external refs found!