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  5. Ceric.05G027200.1

Ceric.05G027200.1 (LAS, SCL18, Ceric.05G027200)


Aliases : LAS, SCL18, Ceric.05G027200

Description : GRAS-type transcription factor & original description: pacid=50578993 polypeptide=Ceric.05G027200.1.p locus=Ceric.05G027200 ID=Ceric.05G027200.1.v2.1 annot-version=v2.1


Gene families : OG0005789 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005789_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ceric.05G027200.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269710 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Aop_g02179 LAS, SCL18 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014862001 LAS, SCL18 RNA biosynthesis.transcriptional activation.GRAS... 0.07 OrthoFinder output from all 47 species
Nbi_g06152 LAS, SCL18 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c5_17790V3.1 LAS, SCL18, Pp3c5_17790 GRAS family transcription factor 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000284 LAS, SCL18 not classified & original description: CDS=1-2016 0.03 OrthoFinder output from all 47 species
Solyc07g066250.1.1 LAS, SCL18,... transcription factor (GRAS) 0.09 OrthoFinder output from all 47 species
Zm00001e037617_P001 LAS, SCL18,... transcription factor (GRAS) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 82 451
No external refs found!